Manuals

CCP4 - Program Documentation

Coot - User Manual

CNS - ver 1.1

CNS - ver 1.2

Data processing - Data processing with HKL2000
Data processing - Denzo Quick Tutorial
Data processing - XDS Package

Data processing - XDS Tutorial for SSRL
Data processing - Data processing with Mosflm
Data processing - Mosflm 6.2.6 User Guide

Data processing - Mosflm New-GUI
Data processing - Elves

GRASP - Manual

LIGPLOT - Operating manual

Molecular Replacement - EPMR
Molecular Replacement - Phaser-1.3
Molecular Replacement - Molrep

Modeller - A Program for Protein Structure Modeling

MolScript v2.1 - Colour names

MolScript v2.1 - Documentation

O - The manual

O - A to Z

Phenix - Manuals
Phenix - Phenix_Wiki
Phenix - Structure refinement

PyMOL - Introduction
PyMOL - MacPyMOL Download Page
PyMOL - Cameron Mura
PyMOL - Caver
PyMOL - Creating a eye-catching figure
PyMOL - Scripts
PyMOL - PyMolWiki
PyMOL - Tips
PyMOL - Schildbach_Lab_Pymol_Tutorials

PyMOL and Movies - eMovie
PyMOL and Movies - Daan van Aalten (University of Dundee)
PyMOL and Movies - Slerpy on PyMolWiki
PyMOL and Movies - Script using scenes

PyMOL and Movies - Morphing Movie

Raster3D - Main page

REFMAC - User's manual

SHELX - SHELX-97 Online HTML Documentation at UCSF

SHELX - SHELXL refinement tutorial

SHELX - SHELXL FAQ index

SHELX - SHELXTL Tutorial

VMD - User's Guide